^co-first author; *corresponding/senior author; Also available at Google Scholar and ORCID.

Major Work

2024
  1. Jian Zou, Osama Shah, Yu-Chiao Chiu, Tianzhou Ma, Jennifer M Atkinson, Steffi Oesterreich*, Adrian V. Lee*, George C. Tseng* (2024). Systems approach for congruence and selection of cancer models towards precision medicine, PLoS Computational Biology, 20(1), e1011754.
2022
  1. Steffi Oesterreich^, Azadeh Nasrazadani^, Jian Zou^, Neil Carleton, …, George Tseng, Adrian V. Lee, Nicole Williams*, Megan Kruse* (2022). Clinicopathological features and outcomes comparing patients with invasive ductal and lobular breast cancer, JNCI: Journal of the National Cancer Institute, 114(11), 1511-1522.

  2. Jian Zou^, Yannick Düren^, Li-Xuan Qin* (2022). PRECISION.seq: An R package for benchmarking depth normalization in microRNA sequencing, Frontiers in Genetics, 12.

Collaborative Work

2023
  1. George Tseng*, Tianzhou Ma, Jian Zou (2023). Of mouse models and humans, American Scientist, 111(4), 213-214. (An invited, non-peer-reviewed article)

  2. Sayali Onkar, Jian Cui, Jian Zou, Carly Cardello, Anthony R Cillo, Mostofa Rafid Uddin, April Sagan, Marion Joy, Hatice U Osmanbeyoglu, Katherine Pogue-Geile, Priscilla F. McAuliffe, Peter C. Lucas, George C. Tseng, Adrian V Lee, Tullia C Bruno, Steffi Oesterreich*, Dario A.A.Vignali* (2023). Immune landscape in invasive ductal and lobular breast cancer reveals a divergent macrophage-driven microenvironment, Nature Cancer, 1-19.

  3. Wei Zong, Tanbin Rahman, Li Zhu, Xiangrui Zeng, Yingjin Zhang, Jian Zou, Song Liu, Zhao Ren, Jingyi Jessica Li, Etienne Sibille, Adrian V. Lee, Steffi Oesterreich, Tianzhou Ma*, George C. Tseng* (2023). Transcriptomic congruence analysis for evaluating model organisms, Proceedings of the National Academy of Sciences, 120(6), e2202584120. (News: Genetic Engineering and Biotechnology News)

2021
  1. Neil Carleton, Jian Zou, Yusi Fang, …, George C. Tseng, Oscar C. Marroquin, Adrian V. Lee*, Priscilla F. McAuliffe* (2021). Outcomes after sentinel lymph node biopsy and radiotherapy in older women with early-stage, estrogen receptor–positive breast cancer, JAMA Network Open, 4(4), e216322-e216322.

  2. Terrell E. Jones, Jian Zou, George C. Tseng, Somak Roy, Rohit Bhargava* (2021). The utility of next-generation sequencing in advanced breast and gynecologic cancers: experience of a large tertiary care women’s hospital, American Journal of Clinical Pathology, 156(3), 455-460.

2020
  1. Li-Xuan Qin*, Jian Zou, Jiejun Shi, Ann Lee, Aleksandra Mihailovic, Thalia A. Farazi, Thomas Tuschl, Samuel Singer (2020). Statistical assessment of depth normalization for small RNA sequencing, JCO Clinical Cancer Informatics, 4, 567-582.

  2. Peng Liu†, Silvia Liu†, Yusi Fang, Xiangning Xue, Jian Zou, George C. Tseng*, Liza Konnikova* (2020). Recent advances in computer-assisted algorithms for cell subtype identification of cytometry data, Frontiers in Cell and Developmental Biology, 8, 234.

In Preparation

  1. Jian Zou, George C. Tseng*. Mutual information for multi-study multi-class concordant biomarker detection.

  2. Jian Zou, Yujia Li, George C. Tseng*. CGMM: A novel algorithm for constrained model-based clustering.